Appendix C: Isotopic Chemistry

This appendix provides a basic overview of stable isotopeTwo atoms with the same number of protons but a different number of neutrons. chemistry. Common questions are addressed and examples of applications to environmental problems are presented.

C.1 Review of the Atom

The atom consists of protons (positive charge, mass of 1 atomic mass unit, amu), neutrons (no charge, mass of 1 amu), and electrons (negative charge [-1], mass much smaller than 1 amu). The number of protons in an atom determines the element and determines the behavior of the atom in chemical reactions.  A neutral atom has the same number of electrons and protons.

C.2 How does CSIA compare to radioisotope chemistry?

CSIA as discussed in this document is concerned only with stable isotopes of individual compounds. Stable isotope compositions of individual compounds are a result of their original source feedstock, and then they undergo isotopic changes as a result of biodegradationA process by which microorganisms transform or alter (through metabolic or enzymatic action) the structure of chemicals introduced into the environment (USEPA 2011). and other processes. The changes in the stable isotopes compositions are relatively small during these processes but can be measured with great precision and accuracy.

C.3 What are stable isotopes?

Stable isotopes do not undergo radioactive decay.  For example, deuterium (a hydrogen atom with one neutron) is stable; however, tritium (another isotope of hydrogen) will transform over time to a different element (helium) with a change in the number of protons, and is therefore a radioactive isotope. While isotopes behave identically in chemical reactions, a very small difference in bond energy exists between heavy and light isotopes. In general, a compound containing the lighter isotope will react faster than one with the heavier isotope, leading to a fractionation effect during reactions.

In the field, various factors affect isotopic composition. Individual compounds have different isotopic compositions as a result of various fractionation processes occurring during formation and degradation of the compounds. The stable isotope composition of an individual compound at a site reflects the natural abundance of the isotopes and may or may not have been affected by a number of biological or nonbiological processes.

C.4 Which stable isotopes are most commonly used in environmental studies?

At present, the most commonly used stable isotopes in environmental studies are carbon and hydrogen. However, in addition to the widely applicable carbon and hydrogen isotopes, several other stable isotopes apply for some sites, especially isotopes of chlorine, nitrogen, and oxygen. In the past several years, an increasing number of studies have used chlorine isotopes, primarily as a result of online techniques becoming available for analyzing chlorine isotopes. Nitrogen isotopes have been used in a number of studies, particularly those involving explosive residues at military sites. Oxygen isotopes have been used in studies of inorganic contaminants, primarily perchlorate.

C.5 What methods are available for the determination of stable isotopic ratios?

Stable isotopes can be determined in two ways: bulk (offline) and gas chromatography-isotope ratio mass spectrometry (GC-IRMS). The traditional bulk or offline method has been used for the past 60 or 70 years and converts the compound of interest to the measured speciesThe lowest taxonomic rank, and the most basic unit or category of biological classification.(www.biology-online.org) (for instance, CO2 for carbon). The converted sample is then introduced into a dual inlet mass spectrometer simultaneously with the relevant isotope standard and the relative isotope fractionation is measured. This method can be used for pure compounds or for complex mixtures such as crude oils without pre-separation of individual compounds. However in the case of mixtures, only one isotope value is obtained (bulk isotope value), which generates a weighted average of the isotopic composition of all the individual compounds in the mixture.

C.6 What about oxygen, which has three stable isotopes?

The isotopic ratios for oxygen are of particular interest because there are three stable isotopes of oxygen, 16O, 17O, and 18O, which are of interest in environmental applications.

C.7 What is actually measured?

What is actually measured is technique dependent. For carbon in VOCs, hydrogen in VOCs and both chlorine and oxygen in perchlorate, as well as many other applications, the chemical conversion technique is used. For chlorine in VOCs, either the direct GC-IRMS or the GC-MS technique is used.

C.8 What is the basic notation for expressing isotopic ratios?

Isotopic ratios are expressed using the delta notation (δ), and the same formula is used regardless of the isotope being determined, although the international standards used are different for the different isotopes (see Section C.9, Table C-2). The δ notation is expressed in the following manner, shown for carbon-13:

Rx corresponds to the ratio of the intensity of the heavy to light isotope in the sample and in the case of RStd, it is the ratio of the heavy to light isotope in the international standard. In the case of carbon, the species actually measured by the IRMS are mass 45 and 44 which correspond to the masses of the 13CO2 and the 12CO2 produced by combustion of the sample. For other isotopes, the appropriate species are again measured and compared to the appropriate standards for each isotope.

C.9 What are the international standards used in the isotopic measurements?

Table C-2 presents the reference standards for some of the most commonly applied stable isotopes.

C.10 Natural Abundance of Stable Isotopes and Isotopic Fractionation

Elements have multiple naturally occurring isotopes.  This condition is reflected in the atomic masses of the elements as presented in the periodic table. For example, the most common isotope of carbon is carbon-12 (6 protons, 6 neutrons, or atomic weight of 12.0) but the atomic mass of carbon is 12.011, reflecting the weighted average of 98.9% carbon-12 and 1.1% carbon-13.  This small percentage of carbon-13 may then be fractionated between specific compounds in a system (for instance, the degradation intermediate product is slightly ‘lighter’ in carbon-13, and the parent compound is slightly ‘heavier’), but the overall abundance of the isotopes is not impacted. 

C.11 What do these isotope ratios represent and why are they generally negative?

The δ values are an expression of the difference in the isotope ratio of the sample relative to the appropriate international standard, for example a compound that has a carbon isotope value of -25 per mil and is depleted by 25 parts per thousand in the heavier isotope relative to the isotopic composition of the standard. Note that for two samples that are (as an example) -20 and -30 per mil, one can say that the -20 sample is isotopically heavier than the -30 per mil sample. This is sometimes confusing since these are negative numbers. However, the key is to remember that the numbers are reflecting the heavier isotope content of the particular sample being characterized

The majority of environmental hydrocarbon and chlorohydrocarbon samples will have negative isotope ratios.  The values for isotopic fractionation at sites are generally isotopically light (negative) compared to the standards due to the selection of specific standards. The carbon standard consists of carbonate, or inorganic carbon, which tends to be isotopically heavy compared to the organic carbon compounds of interest at environmental sites.

C.12 What is the Rayleigh equation and how does it relate fractionation to degradation?

The stable isotope compositions of individual compounds can provide two basic types of information in environmental studies: source discrimination (or correlation), and the extent of biodegradation.  Source discrimination or apportionment of mixed sources is dependent on sources that are isotopically distinct, due to differing production processes and degree of source degradation.  The Rayleigh equation is used to relate degradation-induced decreases in concentrations directly to concomitant changes in bulk (average over the whole compound) isotope ratios.

C.13 What is an Enrichment Factor?

The enrichment factor is an indication of the degree of isotopic fraction between the parent and intermediate compound during a specific degradation reaction, and it is derived from the fractionation factor α through the relationship ε=1000 (α-1). The factor α reflects the ratio of the rate constants for the heavy/light isotopes. In other words, the different rates at which these species react reflects the extent of changes expected in the isotopic composition of a particular compound during its degradation.

C.14 What can be learned by the simultaneous CSIA of two types of atoms?

Studies have shown the mechanism of MTBE biodegradation can be discerned by plotting δ2H vs. δ13C of MTBE, as shown in Figure C-2 (Zwank et al. 2005).

C.15 Is CSIA useful for “abiotic” remediation?

One subset of abiotic remediation is called biogeochemical transformation. This name recognizes the importance of biology and geochemistry in a remediation that relies upon abiotic reactions and is often passive. ESTCP maintains a project on this subject (ER-201124) and held a workshop in February 2008 that issued a report (ESTCP 2008) discussing these transformations in detail. Because the carbon enrichment factors for this process are of a larger magnitude than those of microbial mediated reductive dechlorination, the use of CSIA to distinguish biogeochemical transformation from reductive dechlorination is being pursued (Liang et al. 2007). Similarly, the carbon enrichment factor for the biogeochemical transformation of 1,2-dibromoethane (ethylene dibromide or EDB) is also of a much larger magnitude than the microbial process (USEPA 2008b).

C.16 What are some applications of stable isotopes in environmental cases?

Stable isotopes are useful for source discrimination and for determining the extent of natural attenuation.

C.17 Are there common sense rules for CSIA applications?

Isotopic fractionation provides definitive evidence of degradation of compounds. As mentioned above, isotopic fractionation is used to assess source discrimination and natural attenuation at environmental sites. Stable isotope fractionation data are only useful in the context of a well-developed conceptual site model.

C.18 What are the interpretations of environmental CSIA applications?

Interpretation of environmental CSIA applications include source correlations; source isotopic signatures; degree of biodegradation (and impact on source isotopic signature); travel distance, hydrogeologic factors, potential for degradation between sources and the site of interest; and natural attenuation.

C.19 What are the limitations of CSIA?

CSIA is subject to several limitations.

C.20 References

Aeppli C., Holmstrand, P. Andersson, and O. Gustafsson. 2010 "Direct Compound-Specific Stable Chlorine Isotope Analysis of Organic Compounds with Quadrupole GC/MS Using Standard Isotope Bracketing." Anal. Chem. 82 (1): 420-426.

Beneteau, K. M., Aravena, R. and Frape, S. K. 1999. "Isotopic characterization of chlorinated solvents-laboratory and field results." Organic Geochemistry 30:739-753.

Coplen,T.B., J. K. Böhlke, P. De Bièvre, T. Ding, N. E. Holden, J. A. Hopple, H. R. Krouse, A. Lamberty, H. S. Peiser, K. Révész, S. E. Rieder, K. J. R. Rosman, E. Roth, P. D. P. Taylor, R. D. Vocke, JR.8 and Y. K. Xiao. 2002. "Isotope-Abundance Variations of Selected Elements (IUPAC Technical Report)." Pure and Applied Chemistry 74 (10):1987-2017.

ESTCP ER-201124. http://www.serdp.org/Program-Areas/Environmental-Restoration/Contaminated-Groundwater/Persistent-Contamination/ER-201124/ER-201124/(language)/eng-US

ESTCP 2008. Workshop on In Situ Biogeochemical Transformation of Chlorinated Solvents. Feb. 2008.

Gray, J. R., G. Lacrampe-Couloume, D. Gandhi, K. M. Scow, R. D. Wilson, D. M. Mackay and B. Sherwood Lollar. 2002. “Carbon and hydrogen isotopic fractionation during biodegradation of methyl tert-butyl ether.” Environmental Science &Technology 36:1931-1938.

Jin, B., C. Laskov, M. Rolle, and S.B. Haderlein. 2011. “Chlorine Isotope Analysis of Organic Contaminants Using GCqMS: Method Optimization and Comparison of Different Evaluation Schemes.” Environmental Science & Technology 45:5279-5286.

Liang, X., Y. Dong, T. Kuder, L. R. Krumholz, R. P. Philp and E. C. Butler. 2007. “Distinguishing abiotic and biotic transformation of tetrachloroethylene and trichloroethene by stable carbon isotope fractionation.” Environmental Science & Technology 41 (20): 7094-7100.

Kuder, T.; Philp, R. P.; Kolhatkar, R.; Wilson, J. T.; Allen, J. 2002. “Application of stable carbon and hydrogen isotopic techniques for monitoring biodegradation of MTBE in the field.” In NGWA/API Petroleum Hydrocarbons and Organic Chemicals in GroundWater; American Petroleum Institute.

Murphy, B. L. and R. D. Morrison. 2007. Introduction to Environmental Forensics. Edition 2. Elsevier Science. Philp, R.P and E. Jardé, Chapter 10: "Application of Stable Isotopes and Radio Isotopes in Environmental Forensics."

Rosell, M., R. Gonzalez-Olmos, T. Rohwerder, K. Rusevova, A. Georgi, F.-D. Kopinke, and H.H. Richnow. 2012. "Critical evaluation of 2D-CSIA scheme for distinguishing fuel oxygenate degradation reaction mechanisms." Environmental Science &Technology 46: 4757-4766.

Rosman, K.J.R. and P.D.P Taylor.1998. Isotopic compositions of the elements (Technical Report). Pure & Applied Chemistry 70 (1):217-235.

Santrock J, Studley S.A. and Hayes J.M. 1985. “Isotopic analyses based on the mass spectrum of carbon dioxide”. Anal. Chem. 57:14444-1448.

Sessions A.L., T.W. Burgoyne, and J. M. Hayes. 2001. "Correction of H3+ Contributions in Hydrogen Isotope Ratio Monitoring Mass Spectrometry." Analytical Chemistry 73: 192-199.

Shouakar-Stash, O., Drimmie, R.J., Zhang, M. and Frape, S.K. 2006. “Compound Specific Chlorine Isotopic Ratios of TCE, PCE and DCE isomers by direct injection using CF-IRMS.” Applied Geochemistry 21:766-781.

USEPA 2008a. A Guide for assessing biodegradation and source identification of organic ground water contaminants using compound specific isotope analysis (CSIA)Analyzes the relative abundance of various stable isotopes (e.g., ¹³C:¹²C, ²H:¹H). Degradation processes can cause shifts in the relative abundance of stable isotopes of the contaminant; changes in isotopic ratios can be measured.. EPA 600/R-08/148.

USEPA. 2008b. Natural Attenuation of the Lead Scavengers 1,2-Dibromoethane (EDB) and 1,2-Dichloroethane (1,2-DCA) at Motor Fuel Release Sites and Implications for Risk Management. 600/R-08/107.

Zwank, L., M. Berg, M. Elsner, T.C. Schmidt, R.P. Schwartzenbach, and S.B. Haderlein. 2005. "New evaluation scheme for two-dimensional isotope analysis to decipher biodegradation processes: Application to groundwater contamination by MTBE." Environmental Science & Technology 39:1018-1029.

 


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